query-b8e83a36d1580f7e1d085fb3cb64e9f7
Get all Gene Ontology information and references for proteins, but only show statements where the refernece is a journal article published in Nature, Cell, or Science SELECT ?proteinLabel ?uniprot ?valueLabel ?goTypeLabel ?paperLabel ?PMID ?PMCID WHERE { ?protein wdt:P352 ?uniprot . ?protein p:P680|p:P681|p:P682 ?statement . ?statement ps:P680|ps:P681|ps:P682 ?value . ?value wdt:P31 ?goType . ?statement prov:wasDerivedFrom/pr:P248 ?paper . ?paper wdt:P698 ?PMID . ?paper wdt:P1433 ?journal . values ?journal {wd:Q192864 wd:Q180445 wd:Q655814} SERVICE wikibase:label { bd:serviceParam wikibase:language "en". } } limit 1000
Use at
- https://query.wikidata.org/sparql
PREFIX wikibase: <http://wikiba.se/ontology#>
PREFIX wdt: <http://www.wikidata.org/prop/direct/>
PREFIX wd: <http://www.wikidata.org/entity/>
PREFIX ps: <http://www.wikidata.org/prop/statement/>
PREFIX prov: <http://www.w3.org/ns/prov#>
PREFIX pr: <http://www.wikidata.org/prop/reference/>
PREFIX p: <http://www.wikidata.org/prop/>
PREFIX bd: <http://www.bigdata.com/rdf#>
#Get all Gene Ontology information and references for proteins, but only show statements where the refernece is a journal article published in Nature, Cell, or Science
SELECT ?proteinLabel ?uniprot ?valueLabel ?goTypeLabel ?paperLabel ?PMID ?PMCID WHERE {
?protein wdt:P352 ?uniprot .
?protein p:P680|p:P681|p:P682 ?statement .
?statement ps:P680|ps:P681|ps:P682 ?value .
?value wdt:P31 ?goType .
?statement prov:wasDerivedFrom/pr:P248 ?paper .
?paper wdt:P698 ?PMID .
?paper wdt:P1433 ?journal .
values ?journal {wd:Q192864 wd:Q180445 wd:Q655814}
SERVICE wikibase:label { bd:serviceParam wikibase:language "en". }
} limit 1000
Query found at
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v7("?PMID"):::projected
v5("?goType")
v9("?journal")
v6("?paper")
v1("?protein")
v3("?statement")
v2("?uniprot"):::projected
v4("?value")
a1((" "))
c16(["en"]):::literal
c14(["bd:serviceParam"]):::iri
v1 --"p:direct/P352"--> v2
subgraph union0[" Union "]
subgraph union0l[" "]
style union0l fill:#abf,stroke-dasharray: 3 3;
subgraph union1[" Union "]
subgraph union1l[" "]
style union1l fill:#abf,stroke-dasharray: 3 3;
v1 --"p:P682"--> v3
end
subgraph union1r[" "]
style union1r fill:#abf,stroke-dasharray: 3 3;
v1 --"p:P681"--> v3
end
union1r <== or ==> union1l
end
end
subgraph union0r[" "]
style union0r fill:#abf,stroke-dasharray: 3 3;
v1 --"p:P680"--> v3
end
union0r <== or ==> union0l
end
subgraph union2[" Union "]
subgraph union2l[" "]
style union2l fill:#abf,stroke-dasharray: 3 3;
subgraph union3[" Union "]
subgraph union3l[" "]
style union3l fill:#abf,stroke-dasharray: 3 3;
v3 --"p:statement/P682"--> v4
end
subgraph union3r[" "]
style union3r fill:#abf,stroke-dasharray: 3 3;
v3 --"p:statement/P681"--> v4
end
union3r <== or ==> union3l
end
end
subgraph union2r[" "]
style union2r fill:#abf,stroke-dasharray: 3 3;
v3 --"p:statement/P680"--> v4
end
union2r <== or ==> union2l
end
v4 --"p:direct/P31"--> v5
v3 --"prov:wasDerivedFrom"--> a1
a1 --"p:reference/P248"--> v6
v6 --"p:direct/P698"--> v7
v6 --"p:direct/P1433"--> v9
bind0[/VALUES ?journal/]
bind0-->v9
bind00(["wd:Q192864"])
bind00 --> bind0
bind01(["wd:Q180445"])
bind01 --> bind0
bind02(["wd:Q655814"])
bind02 --> bind0
subgraph s1["http://wikiba.se/ontology#label"]
style s1 stroke-width:4px;
c14 --"wikibase:language"--> c16
end