query-1328e46f595cbc00a7f3862d227b9ebf
Retrieve orthologs of FA-core genes SELECT ?hgnc ?gene ?geneLabel ?ortho ?orthoLabel ?taxonLabel WHERE { values ?hgnc {"FANCA" "FANCB" "FANCC" "FANCE" "FANCF" "FANCG" "FANCL" "FANCM" "FANCD2" "FANCI" "UBE2T" "BRCA2" "BRIP1" "PALB2" "RAD51C" "SLX4" "ERCC4" "RAD51" "BRCA1" "MAD2L2" "XRCC2" "RFWD3"} ?gene wdt:P353 ?hgnc . ?gene wdt:P684 ?ortho . ?ortho wdt:P703 ?taxon SERVICE wikibase:label { bd:serviceParam wikibase:language "en" } }
Use at
- https://query.wikidata.org/sparql
PREFIX wikibase: <http://wikiba.se/ontology#>
PREFIX wdt: <http://www.wikidata.org/prop/direct/>
PREFIX bd: <http://www.bigdata.com/rdf#>
#Retrieve orthologs of FA-core genes
SELECT ?hgnc ?gene ?geneLabel ?ortho ?orthoLabel ?taxonLabel WHERE
{
values ?hgnc {"FANCA" "FANCB" "FANCC" "FANCE" "FANCF" "FANCG" "FANCL" "FANCM" "FANCD2" "FANCI" "UBE2T" "BRCA2" "BRIP1" "PALB2" "RAD51C" "SLX4" "ERCC4" "RAD51" "BRCA1" "MAD2L2" "XRCC2" "RFWD3"}
?gene wdt:P353 ?hgnc .
?gene wdt:P684 ?ortho .
?ortho wdt:P703 ?taxon
SERVICE wikibase:label { bd:serviceParam wikibase:language "en" }
}
Query found at
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?gene"):::projected
v1("?hgnc"):::projected
v3("?ortho"):::projected
v4("?taxon")
c5(["bd:serviceParam"]):::iri
c7(["en"]):::literal
bind0[/VALUES ?hgnc/]
bind0-->v1
bind00(["FANCA"])
bind00 --> bind0
bind01(["FANCB"])
bind01 --> bind0
bind02(["FANCC"])
bind02 --> bind0
bind03(["FANCE"])
bind03 --> bind0
bind04(["FANCF"])
bind04 --> bind0
bind05(["FANCG"])
bind05 --> bind0
bind06(["FANCL"])
bind06 --> bind0
bind07(["FANCM"])
bind07 --> bind0
bind08(["FANCD2"])
bind08 --> bind0
bind09(["FANCI"])
bind09 --> bind0
bind010(["UBE2T"])
bind010 --> bind0
bind011(["BRCA2"])
bind011 --> bind0
bind012(["BRIP1"])
bind012 --> bind0
bind013(["PALB2"])
bind013 --> bind0
bind014(["RAD51C"])
bind014 --> bind0
bind015(["SLX4"])
bind015 --> bind0
bind016(["ERCC4"])
bind016 --> bind0
bind017(["RAD51"])
bind017 --> bind0
bind018(["BRCA1"])
bind018 --> bind0
bind019(["MAD2L2"])
bind019 --> bind0
bind020(["XRCC2"])
bind020 --> bind0
bind021(["RFWD3"])
bind021 --> bind0
v2 --"wdt:P353"--> v1
v2 --"wdt:P684"--> v3
v3 --"wdt:P703"--> v4
subgraph s1["http://wikiba.se/ontology#label"]
style s1 stroke-width:4px;
c5 --"wikibase:language"--> c7
end